Like any antibiotic, clindamycin does not reach only the targeted bacterium: it also affects part of the flora of the large intestine. This imbalance can let dangerous bacteria proliferate, in particular Clostridioides difficile, and cause diarrhoea that can go as far as life-threatening colitis. This colitis can occur during treatment, but also up to about two months after it is stopped.
Clindamycin is among the antibiotics most associated with this risk, alongside penicillins, cephalosporins and fluoroquinolones. Copious, watery or bloody diarrhoea, during or after treatment, warrants prompt medical advice. The gut flora renders other services to the body: its bacteria produce vitamin K2, one of the two forms of vitamin K, with vitamin K1 coming mainly from leafy green vegetables.